The phylogeny of SARS coronavirus
Identifieur interne : 001041 ( Main/Exploration ); précédent : 001040; suivant : 001042The phylogeny of SARS coronavirus
Auteurs : A. J. Gibbs [Australie] ; M. J. Gibbs [Australie] ; J. S. Armstrong [Australie]Source :
- Archives of Virology [ 0304-8608 ] ; 2004-03-01.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- classification : SARS Virus.
- genetics : Arterivirus, Coronavirus, SARS Virus.
- methods : Computational Biology.
- Animals, Genome, Viral, Humans, Mice, Phylogeny, Sequence Alignment.
Abstract
Summary.: Different tree-building methods consistently place the SARS corona-virus (SARS-CoV) as a basal Group 2 coronavirus rather than as an ungrouped species as concluded by others. Detailed comparisons of the SARS-CoV genomic sequence with those of six other coronaviruses failed to find evidence of recombination or genomic rearrangement using computational methods designed for that purpose.
Url:
DOI: 10.1007/s00705-003-0244-0
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Istex, to step Corpus: 000249
- to stream Istex, to step Curation: 000229
- to stream Istex, to step Checkpoint: 000273
- to stream PubMed, to step Corpus: 000715
- to stream PubMed, to step Curation: 000715
- to stream PubMed, to step Checkpoint: 000704
- to stream Ncbi, to step Merge: 000036
- to stream Ncbi, to step Curation: 000036
- to stream Ncbi, to step Checkpoint: 000036
- to stream Main, to step Merge: 001052
- to stream Main, to step Curation: 001041
Le document en format XML
<record><TEI wicri:istexFullTextTei="biblStruct"><teiHeader><fileDesc><titleStmt><title xml:lang="en">The phylogeny of SARS coronavirus</title>
<author><name sortKey="Gibbs, A J" sort="Gibbs, A J" uniqKey="Gibbs A" first="A. J." last="Gibbs">A. J. Gibbs</name>
</author>
<author><name sortKey="Gibbs, M J" sort="Gibbs, M J" uniqKey="Gibbs M" first="M. J." last="Gibbs">M. J. Gibbs</name>
</author>
<author><name sortKey="Armstrong, J S" sort="Armstrong, J S" uniqKey="Armstrong J" first="J. S." last="Armstrong">J. S. Armstrong</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:0A20E8094453836A060366B93B7D041B9FE074C6</idno>
<date when="2004" year="2004">2004</date>
<idno type="doi">10.1007/s00705-003-0244-0</idno>
<idno type="url">https://api.istex.fr/ark:/67375/VQC-NJFD01D5-1/fulltext.pdf</idno>
<idno type="wicri:Area/Istex/Corpus">000249</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">000249</idno>
<idno type="wicri:Area/Istex/Curation">000229</idno>
<idno type="wicri:Area/Istex/Checkpoint">000273</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Checkpoint">000273</idno>
<idno type="wicri:doubleKey">0304-8608:2004:Gibbs A:the:phylogeny:of</idno>
<idno type="wicri:source">PubMed</idno>
<idno type="RBID">pubmed:14991447</idno>
<idno type="wicri:Area/PubMed/Corpus">000715</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000715</idno>
<idno type="wicri:Area/PubMed/Curation">000715</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000715</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000704</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000704</idno>
<idno type="wicri:Area/Ncbi/Merge">000036</idno>
<idno type="wicri:Area/Ncbi/Curation">000036</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000036</idno>
<idno type="wicri:doubleKey">0304-8608:2004:Gibbs A:the:phylogeny:of</idno>
<idno type="wicri:Area/Main/Merge">001052</idno>
<idno type="wicri:Area/Main/Curation">001041</idno>
<idno type="wicri:Area/Main/Exploration">001041</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title level="a" type="main" xml:lang="en">The phylogeny of SARS coronavirus</title>
<author><name sortKey="Gibbs, A J" sort="Gibbs, A J" uniqKey="Gibbs A" first="A. J." last="Gibbs">A. J. Gibbs</name>
<affiliation wicri:level="1"><country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Botany and Zoology, Australian National University, Canberra</wicri:regionArea>
<wicri:noRegion>Canberra</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gibbs, M J" sort="Gibbs, M J" uniqKey="Gibbs M" first="M. J." last="Gibbs">M. J. Gibbs</name>
<affiliation wicri:level="1"><country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Botany and Zoology, Australian National University, Canberra</wicri:regionArea>
<wicri:noRegion>Canberra</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Armstrong, J S" sort="Armstrong, J S" uniqKey="Armstrong J" first="J. S." last="Armstrong">J. S. Armstrong</name>
<affiliation wicri:level="1"><country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Botany and Zoology, Australian National University, Canberra</wicri:regionArea>
<wicri:noRegion>Canberra</wicri:noRegion>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series><title level="j">Archives of Virology</title>
<title level="j" type="abbrev">Arch Virol</title>
<idno type="ISSN">0304-8608</idno>
<idno type="eISSN">1432-8798</idno>
<imprint><publisher>Springer-Verlag</publisher>
<pubPlace>Vienna</pubPlace>
<date type="published" when="2004-03-01">2004-03-01</date>
<biblScope unit="volume">149</biblScope>
<biblScope unit="issue">3</biblScope>
<biblScope unit="page" from="621">621</biblScope>
<biblScope unit="page" to="624">624</biblScope>
</imprint>
<idno type="ISSN">0304-8608</idno>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><idno type="ISSN">0304-8608</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term>
<term>Arterivirus (genetics)</term>
<term>Computational Biology (methods)</term>
<term>Coronavirus (genetics)</term>
<term>Genome, Viral</term>
<term>Humans</term>
<term>Mice</term>
<term>Phylogeny</term>
<term>SARS Virus (classification)</term>
<term>SARS Virus (genetics)</term>
<term>Sequence Alignment</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Alignement de séquences</term>
<term>Animaux</term>
<term>Arterivirus (génétique)</term>
<term>Biologie informatique ()</term>
<term>Coronavirus (génétique)</term>
<term>Génome viral</term>
<term>Humains</term>
<term>Phylogénie</term>
<term>Souris</term>
<term>Virus du SRAS ()</term>
<term>Virus du SRAS (génétique)</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>SARS Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Arterivirus</term>
<term>Coronavirus</term>
<term>SARS Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Arterivirus</term>
<term>Coronavirus</term>
<term>Virus du SRAS</term>
</keywords>
<keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Computational Biology</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Genome, Viral</term>
<term>Humans</term>
<term>Mice</term>
<term>Phylogeny</term>
<term>Sequence Alignment</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Alignement de séquences</term>
<term>Animaux</term>
<term>Biologie informatique</term>
<term>Génome viral</term>
<term>Humains</term>
<term>Phylogénie</term>
<term>Souris</term>
<term>Virus du SRAS</term>
</keywords>
</textClass>
<langUsage><language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Summary.: Different tree-building methods consistently place the SARS corona-virus (SARS-CoV) as a basal Group 2 coronavirus rather than as an ungrouped species as concluded by others. Detailed comparisons of the SARS-CoV genomic sequence with those of six other coronaviruses failed to find evidence of recombination or genomic rearrangement using computational methods designed for that purpose.</div>
</front>
</TEI>
<affiliations><list><country><li>Australie</li>
</country>
</list>
<tree><country name="Australie"><noRegion><name sortKey="Gibbs, A J" sort="Gibbs, A J" uniqKey="Gibbs A" first="A. J." last="Gibbs">A. J. Gibbs</name>
</noRegion>
<name sortKey="Armstrong, J S" sort="Armstrong, J S" uniqKey="Armstrong J" first="J. S." last="Armstrong">J. S. Armstrong</name>
<name sortKey="Gibbs, M J" sort="Gibbs, M J" uniqKey="Gibbs M" first="M. J." last="Gibbs">M. J. Gibbs</name>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/CovidV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001041 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001041 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Sante |area= CovidV1 |flux= Main |étape= Exploration |type= RBID |clé= ISTEX:0A20E8094453836A060366B93B7D041B9FE074C6 |texte= The phylogeny of SARS coronavirus }}
This area was generated with Dilib version V0.6.33. |